GEVI Sensor Comparison
Neuroscience
Methods
Voltage Imaging
Comparison table of genetically encoded voltage indicators across kinetics, sensitivity, excitation wavelength, and model-organism usage.
Keywords
GEVI, voltage sensors, imaging, microscopy, comparison
Measurement in non-neuronal cell culture unless otherwise stated.
| Name | \(\tau_{fast}\) (ms) | % \(\tau_{fast}\) | \(\tau_{slow}\) (ms) | %\(\Delta F/F\) / 10mV | \(\lambda_{ex}\) (nm) | Mouse | Drosophila | Zebrafish | Source | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
| Jarvis | N/A | 2.9 | 470/940 | 3 | X | (Grimm et al., 2024) | ||||
| pAce | 0.5 | 82 | 1.5 | 3.1 | 505/940 | X | X | (Grimm et al., 2024; Kannan et al., 2022) | ||
| pAceR | 2.4 | 54 | 5.4 | 2.8 | 565 | X | X | (Kannan et al., 2022) | ||
| Jedi-2P | 0.5 | 88c | 7.8c | -4.8 | 501/940 | X | (Liu et al., 2022) | |||
| Jedi-1P | 0.53 | 89c | 10.3c | -5.4 | 470 | 5 | (Lu et al., 2023) | d, e | ||
| ASAP6b | 3.7 | 100 | 16 | 470/960 | X | (Lee et al., 2024) | ||||
| ASAP6.1 | 4.0 | 100 | 20 | 470/960 | X | (Lee et al., 2024) | ||||
| Voltron2 | 0.7 | 3.3 | -3.5 | 525f/1135 | X | X | X | (Abdelfattah et al., 2023; Brooks et al., 2024) | f | |
| Positron | 1.8 | 525f | X | (Abdelfattah et al., 2020) | f, g, h | |||||
| Positron2 | 3.7 | X | (Schreiter et al., 2023; Wang et al., 2023) | f, h | ||||||
| QuasAr6a | 1.8 | 90 | 6.3 | 7.3g | 635 | X | (Tian et al., 2023) | |||
| QuasAr6b | 0.8 | 87 | 6.6 | 2.4c | 635 | X | (Tian et al., 2023) | |||
| Archon1 | 0.61 | 88 | 8.1 | 4.3h | 637 | X | X | (Piatkevich et al., 2019, 2018) | b |
Footnotes
- b: Half rise time: 1.9 ms
- c: Organotypic slices
- d: At 32 C - 35 C
- e: Only widefield w/o single cell resolution reported
- f: With dye JF525, other dyes possible
- g: In cultured neurons: 4.7% / 10 mV
- h: In cultured neurons
Bibliography
- Abdelfattah, A.S., Valenti, R., Zheng, J., Wong, A., Podgorski, K., Koyama, M., Kim, D.S., Schreiter, E.R., 2020. A general approach to engineer positive-going eFRET voltage indicators. Nat. Commun. 11, 3444. https://doi.org/10.1038/s41467-020-17322-1
- Abdelfattah, A.S., Zheng, J., Singh, A., Huang, Y.-C., Reep, D., Tsegaye, G., Tsang, A., Arthur, B.J., Rehorova, M., Olson, C.V.L., Shuai, Y., Zhang, L., Fu, T.-M., Milkie, D.E., Moya, M.V., Weber, T.D., Lemire, A.L., Baker, C.A., Falco, N., Zheng, Q., Grimm, J.B., Yip, M.C., Walpita, D., Chase, M., Campagnola, L., Murphy, G.J., Wong, A.M., Forest, C.R., Mertz, J., Economo, M.N., Turner, G.C., Koyama, M., Lin, B.-J., Betzig, E., Novak, O., Lavis, L.D., Svoboda, K., Korff, W., Chen, T.-W., Schreiter, E.R., Hasseman, J.P., Kolb, I., 2023. Sensitivity optimization of a rhodopsin-based fluorescent voltage indicator. Neuron 111, 1547-1563.e9. https://doi.org/10.1016/j.neuron.2023.03.009
- Brooks, F.P., Davis, H.C., Park, P., Qi, Y., Cohen, A.E., 2024. Photophysics-informed two-photon voltage imaging using FRET-opsin voltage indicators. https://doi.org/10.1101/2024.04.01.587540
- Grimm, C., Sims, R.R., Tanese, D., Lafirdeen, A.S.M., Chan, C.Y., Faini, G., Putti, E., Bene, F.D., Papagiakoumou, E., Emiliani, V., 2024. Two-photon voltage imaging with rhodopsin-based sensors. https://doi.org/10.1101/2024.05.10.593541
- Kannan, M., Vasan, G., Haziza, S., Huang, C., Chrapkiewicz, R., Luo, J., Cardin, J.A., Schnitzer, M.J., Pieribone, V.A., 2022. Dual-polarity voltage imaging of the concurrent dynamics of multiple neuron types. Science 378, eabm8797. https://doi.org/10.1126/science.abm8797
- Lee, S., Zhang, G., Gomez, L.C., Testa-Silva, G., Hao, Y.A., Hiramoto, A., Jiang, D., Roth, R.H., Ding, J., Clandinin, T.R., Roska, B., Feldman, D., Ji, N., Lin, M.Z., 2024. Improving positively tuned voltage indicators for brightness and kinetics. https://doi.org/10.1101/2024.06.21.599617
- Liu, Z., Lu, X., Villette, V., Gou, Y., Colbert, K.L., Lai, S., Guan, S., Land, M.A., Lee, J., Assefa, T., Zollinger, D.R., Korympidou, M.M., Vlasits, A.L., Pang, M.M., Su, S., Cai, C., Froudarakis, E., Zhou, N., Patel, S.S., Smith, C.L., Ayon, A., Bizouard, P., Bradley, J., Franke, K., Clandinin, T.R., Giovannucci, A., Tolias, A.S., Reimer, J., Dieudonne, S., St-Pierre, F., 2022. Sustained deep-tissue voltage recording using a fast indicator evolved for two-photon microscopy. Cell 185, 3408-3425.e29. https://doi.org/10.1016/j.cell.2022.07.013
- Lu, X., Wang, Y., Liu, Z., Gou, Y., Jaeger, D., St-Pierre, F., 2023. Widefield imaging of rapid pan-cortical voltage dynamics with an indicator evolved for one-photon microscopy. Nat. Commun. 14, 6423. https://doi.org/10.1038/s41467-023-41975-3
- Piatkevich, K.D., Bensussen, S., Tseng, H., Shroff, S.N., Lopez-Huerta, V.G., Park, D., Jung, E.E., Shemesh, O.A., Straub, C., Gritton, H.J., Romano, M.F., Costa, E., Sabatini, B.L., Fu, Z., Boyden, E.S., Han, X., 2019. Population imaging of neural activity in awake behaving mice. Nature 574, 413-417. https://doi.org/10.1038/s41586-019-1641-1
- Piatkevich, K.D., Jung, E.E., Straub, C., Linghu, C., Park, D., Suk, H.-J., Hochbaum, D.R., Goodwin, D., Pnevmatikakis, E., Pak, N., Kawashima, T., Yang, C.-T., Rhoades, J.L., Shemesh, O., Asano, S., Yoon, Y.-G., Freifeld, L., Saulnier, J.L., Riegler, C., Engert, F., Hughes, T., Drobizhev, M., Szabo, B., Ahrens, M.B., Flavell, S.W., Sabatini, B.L., Boyden, E.S., 2018. A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. Nat. Chem. Biol. 14, 352-360. https://doi.org/10.1038/s41589-018-0004-9
- Schreiter, E.R., Abdelfattah, A., Hasseman, J., Reep, D., Tsegaye, G., Tsang, A., Kolb, I., Wong, A., Chuong, A., Zheng, J., Arthur, B., Korff, W., Team, G.P., 2023. Optimization of Ace2N based voltage indicators. https://doi.org/10.25378/janelia.22325446.v1
- Tian, H., Davis, H.C., Wong-Campos, J.D., Park, P., Fan, L.Z., Gmeiner, B., Begum, S., Werley, C.A., Borja, G.B., Upadhyay, H., Shah, H., Jacques, J., Qi, Y., Parot, V., Deisseroth, K., Cohen, A.E., 2023. Video-based pooled screening yields improved far-red genetically encoded voltage indicators. Nat. Methods 1-13. https://doi.org/10.1038/s41592-022-01743-5
- Wang, Z., Zhang, J., Symvoulidis, P., Guo, W., Zhang, L., Wilson, M.A., Boyden, E.S., 2023. Imaging the voltage of neurons distributed across entire brains of larval zebrafish. https://doi.org/10.1101/2023.12.15.571964