Publications
Preprints & In Preparation
Gill, JV, Karadas, M, Shoham S, Rinberg, D. Temporal sequence geometry enables odor recognition and generalization. bioRxiv (2026). 10.64898/2026.01.20.700611
Zheng, Z, Zutshi, I, Huszár, R, Zhang, Y, Karadas, M, Buzsáki, G, Williams, AH. From labels to latents: revealing state-dependent hippocampal computations with Jump Latent Variable Model. bioRxiv (2025). 10.64898/2025.12.14.694183
Zhang, Y*, Karadas, M*, Zheng, S, Buzsaki, G. State regulation and homeostatic control of acetylcholine neuromodulation in the hippocampus. Under revision — Neuron (*co-first author)
Karadas, M*, Gill, JV*, Theagen, D, Shoham S, Rinberg, D. A Multiscale All-Optical Approach for Investigating Neural Connectivity. In preparation
Journal Publications
2026
Gonzalez, J, Vöröslakos, M, Aykan, D, Soto, N, Nitzan, N, Swanson, R, Karadas, M, Chen, ZS, Buzsáki, G. Subspace communication in the hippocampal-retrosplenial axis. Nature (2026). 10.1038/s41586-026-10481-z
Karadas, M, Gill, JV, Ceballo, S, Shoham, S, Rinberg, D. Rapid temporal processing in the olfactory bulb underlies concentration-invariant odor identification and signal decorrelation. Nature Neuroscience, 29(5):1109–1121 (2026). 10.1038/s41593-026-02250-y
2025
Lambert G.G., et al., Karadas, M, et al. CaBLAM! A high-contrast bioluminescent Ca²⁺ indicator derived from an engineered Oplophorus gracilirostris luciferase. Nature Methods (2025). 10.1038/s41592-025-02972-0
Chen, J., Wang, X., Li, X., Li, X., Zhang, Y*, Yuan, Y*.. Ultrasound Induced Synchronized Neural Activities at 40 Hz and 200 Hz Entrained Corre sponded Oscillations and Improve Alzheimer’s Disease Memory. CNS Neuroscience & Therapeutics (2025), 31:e70351. 10.1111/cns.70351
2024
Zhang, Y*, Karadas, M*, Liu, J, Gu, X, Vöröslakos, M, Li, Y, Tsien, RW, Buzsáki, G. Interaction of acetylcholine and oxytocin neuromodulation in the hippocampus. Neuron, 112(11):1862–1875 (2024). Cover Paper. 10.1016/j.neuron.2024.02.021 (*co-first author)
Sulaman, B, Zhang, Y, Matosevich, N, Kjærby, C, Foustoukos, G, Andersen, M, Eban-Rothschild, A. Emerging Functions of Neuromodulation during Sleep. Journal of Neuroscience (2024). 10.1523/JNEUROSCI.1277-24.2024
Varga, V., Petersen, P., Zutshi, I., Huszar, R., Zhang,Y., Buzsaki, G. Place field-memory field unity of hippocampal neurons. Cell Reports (2024); 43, 113807. 10.1016/j.celrep.2024.113807
2023
Xie, Z., Dong, S., Ji, H., Zhang, Y*, Yuan, Y*.. Transcranial ultrasound sound stimulation at the peak-phase of theta-cycles in the hippocampus improve memory performance. NeuroImage, volume 283, 1 December 2023, 120423. 10.1016/j.neuroimage.2023.120423
Soula, M., Martín-Ávila, A., Zhang, Y, Dhingra, A., Nitzan, N., Sadowski,M.J., Gan, W.B., Buzsáki, G. Forty-hertz light stimulation does not entrain native gamma oscillations or affect Alzheimer’s pathology, Nature Neuroscience. 10.1038/s41593-023-01270-2
Valtcheva, S., Issa, H.A., Bair-Marshal, C.J., Martin, K.A., Jung K., Zhang,Y., Kwon HB, Froemke RC. Neural circuitry for maternal oxytocin release induced by infant cries. Nature, 2023 Sep;621(7980):788-795. 10.1038/s41586-023-06540-4
2021
Zhang, Y, Cao, L, Varga, V, Jing, M, Karadas, M, Li, Y, Buzsáki, G. Cholinergic suppression of hippocampal sharp wave ripples impairs working memory. PNAS (2021). 10.1073/pnas.2016432118
Karadas, M, Olsson, C, Hansen, NW, Perrier, JP, Webb, JL, Huck, A, Andersen, UL, Thielscher, A. In-vitro recordings of neural magnetic activity from the auditory brainstem using color centers in diamond: A simulation study. Frontiers in Neuroscience (2021). 10.3389/fnins.2021.643614
Yuan, Y., Zhang, K., Zhang, Y, Yan, J., Wang, Z., Wang, X., Liu, M., Li, X., The Effect of Low-Intensity Transcranial Ultrasound Stimulation on Neural Oscillation and Hemodynamics in the Mouse Visual Cortex Depends on Anesthesia Level and Ultrasound Intensity. IEEE Transactions on Biomedical Engineering (2021). May;68(5):1619-1626. 10.1109/TBME.2021.3050797
Wang X., Zhang, Y., Kaiqing Zhang, Yi Yuan, Influence of behavioral state on the neuromodulatory effect of low-intensity transcranial ultrasound stimulation on hippocampal CA1 in mouse. NeuroImage(2021). Nov 1;241:118441. 10.1016/j.neuroimage.2021.118441
2020
- Ma, X., Zhang, Y*, Wang, L., Li, N., Barkai, E., Zhang, X., Lin, L. and Xu,J., 2020. The firing of theta state-related septal cholinergic neurons disrupts hippocampal ripple oscillations via muscarinic receptors. Journal of Neuroscience* (2020), 40(18), pp.3591-3603. 10.1523/JNEUROSCI.1568-19.2020
2018
Karadas, M, Wojciechowski, AM, Huck, A, Dalby, NO, Andersen, UL, Thielscher, A. Feasibility and resolution limits of opto-magnetic imaging of neural network activity in brain slices using color centers in diamond. Scientific Reports, 8:4503 (2018). 10.1038/s41598-018-22793-w
Wojciechowski, AM, Karadas, M, Osterkamp, C, Jankuhn, S, Meijer, J, Jelezko, F, Huck, A, Andersen, UL. Precision temperature sensing in the presence of magnetic field noise and vice-versa using nitrogen-vacancy centers in diamond. Applied Physics Letters, 113(1):013502 (2018). 10.1063/1.5026678
Wojciechowski, AM, Karadas, M, Huck, A, Osterkamp, C, Jankuhn, S, Meijer, J, Jelezko, F, Andersen, UL. Contributed review: camera-limits for wide-field magnetic resonance imaging with a nitrogen-vacancy spin sensor. Review of Scientific Instruments, 89(3):031501 (2018). 10.1063/1.5010282
Conference Proceedings
Zhang, Y. Speaker: Functions of neuromodulatory signaling during sleep. SFN 2024, Minisyposium. Chicago, IL, USA.
Zhang, Y. Speaker: Broadcasting Cholinergic Control of Memory Across Time: How Slow Can You Go?. ACNP 2022. Phoenix, AZ, USA.
Zhang, Y. Speaker: Genetic Voltage-indicator Challenge or Best Partner. Alpha-omega 2020, Seminar. Online.
Zhang, Y., Karadas, M., et al, Buzsaki G., Neuromudulation of ACh and OXT in the hippocampus. Society of Neuroscience, PSTR174.10/SS14 (2023).
Zhang, Y., Liu J., Tsien R., Buzsaki G., In-vivo Oxytocin Modulation of Neural Network in Dorsal Hippocampus. Society of Neuroscience, Session 407- Hippocampal Physiology III, (2022).
Zhang, Y., Cao, L., et al, Buzsaki G., Cholinergic dynamic in hippocampus. Society of Neuroscience, session 158.08/V13 (2019)
Karadas, M, Gill, JV, Ceballo, S, Shoham S, Rinberg, D. Olfactory bulb network computations underlie concentration invariant odor identification. Cosyne 2023
Gill, JV, Karadas, M, Shoham S, Rinberg, D. The geometry and role of sequential activity in olfactory processing. Cosyne 2023
Gill, JV, Karadas, M, Shoham S, Rinberg, D. The geometry and role of sequential activity in olfactory processing. SfN 52nd Annual Meeting, 2022
Ceballo, S, Karimimehr, S, Karadas, M, Rinberg, D. A behavioral paradigm for measuring perceptual distances between pairs of natural and artificial odors. SfN 52nd Annual Meeting, 2022
Karadas, M, Gill, JV, Shoham S, Rinberg, D. Olfactory bulb network computations underlie concentration invariant odor identification. SfN 52nd Annual Meeting — Neuroscience 2022
Karadas, M, Gill, JV, Shoham S, Rinberg, D. Multiscale probing of the olfactory bulb reveals a crucial early response window in odor coding. 8th Annual Brain Initiative Meeting, 2022
Wojciechowski, AM, Karadas, M, et al. Towards wide-field imaging of brain slices using a quantum diamond microscope. SPIE Photonics West, 2018. 10.1117/12.2325262
Karadas, M, Gencer, NG. 2D simulations based on general time-dependent reciprocal relation for LFEIT. IEEE EMBC 2015. 10.1109/EMBC.2015.7318669
Tafreshi, AK, Karadas, M, Top, CB, Gencer, NG. Data acquisition system for harmonic motion microwave Doppler imaging. IEEE EMBC 2014. 10.1109/EMBC.2014.6944223